Project: Example project
Released by: RIC Analyst (cribioinfo@uic.edu)
Date: Jan 11, 2019.
Results from a metagenomic co-assembly of all samples. For the assembly all samples were combined into a single sequence dataset for assembly. After assembly, the sequence data for each sample individually was mapped back to the contigs to determine read counts per sample. In addition, the contigs were annotated using Prokka.
| File Name | File Type | Description |
|---|---|---|
| report.html | report | Basic processing report |
| contig_counts.txt | result | Raw sequence counts for each contig |
| contig_data.txt | result | Details of assembled contigs |
| bins_data.txt | result | Taxonomic annotations of metagenomic bins |
| metagenomic_assembly.zip | result | Contigs from the assembly (zipped FASTA format) |
| orf_counts.txt | result | Raw read counts for predicted ORFs |
| annotation_results.zip | result | ZIP file of annotation results as GBK and GFF format with FASTA files of nucleotide and amino acid sequences for each ORF |