Project: My shotgun metagenomics project
Released by: RIC Analyst (cribioinfo@uic.edu)
Date: Fri, Jul 5, 03:16 PM, 2019.
| File Name | File Type | Description |
|---|---|---|
| taxa_raw_counts.zip | result | ZIP archive of taxonomic summaries from phylum to species level result - raw sequence counts |
| taxa_raw_counts.xlsx | result | Excel spreadsheet of taxonomic summaries from phylum to species level result - raw sequence counts |
| taxa_normalized.zip | result | ZIP archive of taxonomic summaries from phylum to species level result - normalized as CPM |
| taxa_normalized.xlsx | result | Excel spreadsheet of taxonomic summaries from phylum to species level result - normalized as CPM |
| taxa_normalized_archaea.xlsx | result | Excel spreadsheet of taxonomic summaries from phylum to species level for archaea - normalized as CPM |
| taxa_normalized_archaea.zip | result | ZIP archive of taxonomic summaries from phylum to species level for archaea - normalized as CPM |
| taxa_normalized_bacteria.xlsx | result | Excel spreadsheet of taxonomic summaries from phylum to species level for bacteria - normalized as CPM |
| taxa_normalized_bacteria.zip | result | ZIP archive of taxonomic summaries from phylum to species level for bacteria - normalized as CPM |
| taxa_normalized_fungi.xlsx | result | Excel spreadsheet of taxonomic summaries from phylum to species level for fungi - normalized as CPM |
| taxa_normalized_fungi.zip | result | ZIP archive of taxonomic summaries from phylum to species level for fungi - normalized as CPM |
| taxa_normalized_virus.xlsx | result | Excel spreadsheet of taxonomic summaries from phylum to species level for virus - normalized as CPM |
| taxa_normalized_virus.zip | result | ZIP archive of taxonomic summaries from phylum to species level for virus - normalized as CPM |
| funl_raw_counts.xlsx | result | Excel spreadsheet of funtional gene summaries - raw sequence counts |
| funl_table.txt | result | Counts table of functional genes (orthologs) in TSV format |
| funl_table.biom | result | Counts table of functional genes (orthologs) in BIOM format. |
| funl_raw_counts.zip | result | ZIP archive of functional gene summaries - raw sequence counts |
| funl_filtered_raw_counts.xlsx | result | Excel spreadsheet of filtered funtional gene summaries - raw sequence counts |
| funl_filtered_table.txt | result | Filtered counts table of functional genes (orthologs) in TSV format |
| funl_table_filtered.biom | result | Filtered counts table of functional genes (orthologs) in BIOM format. |
| funl_filtered_raw_counts.zip | result | ZIP archive of filtered functional gene summaries - raw sequence counts |
| report.html | report | Basic processing report |