RRC Data Portal

Release - Results from your scRNA-seq project

Project: My scRNA-seq project
Released by: RIC Analyst (cribioinfo@uic.edu)
Date: Fri, Jul 5, 03:16 PM,2019.

Results for single-cell demultiplexing. 
File Name Description File Type
report.html Quantification report report
sc5p_v2_mm_balbc_T_1k_5gex_matrix/features.tsv.gz Gene features for sc5p_v2_mm_balbc_T_1k_5gex result
sc5p_v2_mm_balbc_T_1k_5gex_matrix/barcodes.tsv.gz Feature list (cell barcodes) for sc5p_v2_mm_balbc_T_1k_5gex result
sc5p_v2_mm_balbc_T_1k_5gex_matrix/matrix.mtx.gz Gene counts in sparse matrix format for sc5p_v2_mm_balbc_T_1k_5gex result
sc5p_v2_mm_balbc_T_1k_5gex.cloupe Cellranger Cloupe file for sc5p_v2_mm_balbc_T_1k_5gex result
sc5p_v2_mm_balbc_T_1k_t_airr_rearrangement.tsv Annotated contigs and consensus sequences of VDJ rearrangements in the AIRR format for sc5p_v2_mm_balbc_T_1k_t result
sc5p_v2_mm_balbc_T_1k_t_all_contig_annotations.csv High-level and detailed annotations of each contig for sc5p_v2_mm_balbc_T_1k_t result
sc5p_v2_mm_balbc_T_1k_t_all_contig_fasta.gz Sequences for assembled VD(J) contigs for sc5p_v2_mm_balbc_T_1k_t result
sc5p_v2_mm_balbc_T_1k_t_consensus_annotations.csv High-level and detailed annotations of each clonotype consensus sequence for sc5p_v2_mm_balbc_T_1k_t result
sc5p_v2_mm_balbc_T_1k_t_clonotypes.csv High-level descriptions of each clonotype for sc5p_v2_mm_balbc_T_1k_t result
sc5p_v2_mm_balbc_T_1k_t_filtered_contig_annotations.csv High-level annotations of each high-confidence, cellular contig for sc5p_v2_mm_balbc_T_1k_t result
sc5p_v2_mm_balbc_T_1k_t.cloupe Cellranger Vloupe file for sc5p_v2_mm_balbc_T_1k_t result