Project: Example project
Released by: RIC Analyst (cribioinfo@uic.edu)
Date: Fri, Jul 5, 03:16 PM,2019.
Results from an assembly using both long-read (Nanopore) and short-read (Illumina) sequence data. The long-read data were used for the initial assembly and then the short-read data was used to error-correct (polish) the assembly. In addition, the contigs were annotated using Prokka.
| File Name | File Type | Description |
|---|---|---|
| report.html | report | Basic processing report |
| sample_A.gene-AA.fa | result | Protein sequences of predicted ORFs for sample A |
| sample_A.gene-NT.fa | result | Nucleotide sequences of predicted ORFs for sample A |
| sample_A.annotation.list.txt | result | List of predicted ORFs for sample A |
| sample_A.annotation.txt | result | Annotations of predicted ORFs for sample A |
| sample_A.gff | result | Details of predicted ORFs for sample_A in GFF format |
| sample_A.gbk | result | Annotated sequences of contigs for sample A |
| sample_A-contigs.zip | result | ZIP compressed FASTA file of contigs for sample A |