Batch	Modification	T	A	A	A	C	T	A	C	C	A	G	A	A	G	T	A	T	C	A	G	T	G	C	T	A	A	A	A	G	T	A	T	C	C	T	T	T	T	C	T	T	T	C	C	T	A	C	A	G	A	T	T	C	C	T	C	C	T	T	A	T	G	G	C	C	A	A	C	A	A	G	G	C	C	C	C	A	G	C	G	G	G	T	A	T	G	G	T	C	A	G	C	A	G	G	G	C	C	A	G	A	C	T	C	C	A	T	A	T	T	A	C	A	A	C	C	A	G	C	A	A	A	G	T	C	C	T	C	A	C	C	C	C	C	A	G	C	A	G	C	A	G	C	A	G	C	C	A	C	C	C	T	A	C	T	C	T	C	A	G	C	A	A	C	C	A	C	C	A	T	C	C	C	A	G	A	C	C	C	C	T	C	A	T	G	C	T	C	A	A	C	C	T	T	C	A	T	A	T	C	A	G	C	A	G	C	A	G	C	C	T	C	A	G	T	C	T	C	A	G	C	C	A	C	C	A	C	A	G	C	T	C	C	A	G	T	C	A	T	C	T	C	A	G	C	C	T	C	C	A	T	A	T	T	C	C	C	A	G	C	A	G	C	C	A
Sample008	Insertions	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	1.0	2.0	1.0	0.0	1.0	2.0	1.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	2.0	0.0	2.0	2.0	0.0	0.0	0.0	0.0
Sample008	Insertions_Left	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	1.0	1.0	0.0	0.0	1.0	1.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0
Sample008	Deletions	38.0	0.0	1.0	2.0	12.0	7.0	7.0	0.0	32.0	11.0	2.0	0.0	9.0	1.0	2.0	5.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	7.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	2.0	2.0	2.0	7361.0	7367.0	7367.0	7367.0	7367.0	7367.0	7367.0	7365.0	7365.0	7365.0	7365.0	6.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	40.0	40.0	40.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	1.0	0.0	0.0	0.0	1.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	196.0	196.0	196.0	197.0	196.0	196.0	196.0	197.0	197.0	197.0	197.0	197.0	197.0	197.0	198.0	198.0	198.0	198.0	203.0	201.0	201.0	202.0	202.0	202.0	202.0	202.0	202.0	201.0	203.0	202.0	202.0	203.0	202.0	202.0	202.0	202.0	202.0	203.0	202.0	202.0	202.0	202.0	202.0	202.0	202.0	202.0	202.0	201.0	201.0	201.0	201.0	201.0	202.0	202.0	6.0	7.0	6.0	7.0	11.0	5.0	36.0	5.0	5.0	27.0	14.0	13.0	9.0	15.0	4.0	4.0	5.0	0.0
Sample008	Substitutions	4.0	42.0	0.0	2.0	61.0	33.0	4.0	4.0	5.0	5.0	5.0	5.0	4.0	1.0	9.0	1.0	31.0	4.0	8.0	7.0	39.0	19.0	8.0	7.0	1.0	31.0	16.0	5.0	2.0	21.0	1.0	15.0	9.0	6.0	51.0	11.0	7.0	12.0	3.0	7.0	7.0	8.0	11.0	2.0	16.0	4.0	24.0	4.0	18.0	6.0	26.0	51.0	48.0	20.0	16.0	3.0	10.0	15.0	7.0	2.0	26.0	3.0	10.0	4.0	8.0	6.0	10.0	4.0	9.0	34.0	21.0	7.0	8.0	24.0	18.0	7.0	14.0	2.0	6.0	6.0	7.0	8.0	10.0	1.0	3.0	16.0	8.0	10.0	14.0	4.0	12.0	16.0	3.0	14.0	22.0	16.0	22.0	8.0	3.0	9.0	25.0	5.0	4.0	3.0	5.0	5.0	6.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	3.0	6.0	1.0	1.0	7.0	3.0	3.0	10.0	5.0	12.0	4.0	4.0	4.0	2.0	2.0	3.0	6.0	9.0	4.0	4.0	1.0	7.0	4.0	4.0	11.0	6.0	8.0	5.0	15.0	2.0	3.0	13.0	3.0	4.0	3.0	8.0	6.0	4.0	0.0	14.0	7.0	8.0	3.0	14.0	0.0	3.0	15.0	4.0	11.0	15.0	7.0	4.0	11.0	8.0	6.0	8.0	8.0	8.0	0.0	2.0	12.0	11.0	6.0	19.0	8.0	15.0	9.0	10.0	13.0	8.0	30.0	2.0	4.0	23.0	7.0	5.0	13.0	20.0	2.0	0.0	9.0	23.0	8.0	4.0	9.0	6.0	1.0	6.0	11.0	2.0	7.0	23.0	6.0	8.0	1.0	5.0	5.0	7.0	8.0	14.0	2.0	9.0	8.0	5.0	8.0	7.0	1.0	7.0	24.0	13.0	5.0	20.0	8.0	8.0	40.0	6.0	8.0	10.0	7.0	4.0	9.0	9.0	4.0	7.0	2.0	7.0	15.0	15.0	13.0	7.0	11.0	2.0	7.0	12.0	8.0	8.0	5.0	6.0	10.0	7.0	10.0	8.0	17.0	11.0	29.0	36.0
Sample008	All_modifications	42.0	42.0	1.0	4.0	73.0	40.0	12.0	5.0	38.0	18.0	8.0	5.0	14.0	4.0	12.0	7.0	32.0	6.0	8.0	7.0	39.0	19.0	8.0	7.0	1.0	31.0	16.0	6.0	2.0	21.0	1.0	15.0	9.0	6.0	51.0	11.0	7.0	13.0	3.0	7.0	7.0	8.0	11.0	2.0	16.0	4.0	24.0	4.0	18.0	6.0	26.0	51.0	48.0	20.0	16.0	3.0	10.0	15.0	9.0	2.0	26.0	3.0	10.0	4.0	8.0	6.0	10.0	4.0	9.0	34.0	21.0	7.0	8.0	24.0	18.0	14.0	14.0	2.0	7.0	6.0	7.0	8.0	10.0	1.0	3.0	16.0	8.0	10.0	14.0	4.0	12.0	16.0	3.0	14.0	22.0	17.0	22.0	8.0	3.0	9.0	25.0	5.0	6.0	5.0	7.0	7.0	7367.0	7367.0	7367.0	7367.0	7367.0	7367.0	7367.0	7365.0	7365.0	7365.0	7365.0	6.0	2.0	3.0	6.0	2.0	1.0	7.0	3.0	3.0	10.0	5.0	12.0	4.0	4.0	4.0	2.0	6.0	4.0	6.0	9.0	4.0	4.0	1.0	7.0	4.0	4.0	51.0	46.0	48.0	5.0	15.0	2.0	3.0	15.0	3.0	4.0	3.0	8.0	6.0	4.0	1.0	14.0	7.0	9.0	3.0	14.0	0.0	4.0	15.0	4.0	12.0	15.0	7.0	4.0	11.0	10.0	6.0	8.0	8.0	8.0	0.0	2.0	12.0	11.0	6.0	19.0	8.0	15.0	9.0	10.0	13.0	8.0	30.0	2.0	4.0	23.0	203.0	201.0	209.0	217.0	198.0	196.0	205.0	220.0	205.0	201.0	206.0	203.0	198.0	203.0	209.0	200.0	205.0	221.0	209.0	209.0	202.0	207.0	207.0	209.0	210.0	216.0	204.0	210.0	211.0	207.0	210.0	210.0	203.0	209.0	226.0	215.0	207.0	223.0	210.0	210.0	242.0	208.0	210.0	212.0	209.0	206.0	211.0	210.0	205.0	208.0	203.0	208.0	217.0	217.0	19.0	14.0	17.0	9.0	18.0	17.0	44.0	13.0	10.0	35.0	26.0	20.0	21.0	25.0	21.0	15.0	34.0	36.0
Sample009	Insertions	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	4.0	5.0	2.0	1.0	0.0	1.0	4.0	5.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	1.0	2.0	1.0	0.0	3.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Sample009	Insertions_Left	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	4.0	1.0	1.0	0.0	0.0	1.0	3.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	1.0	1.0	0.0	0.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Sample009	Deletions	40.0	2.0	1.0	0.0	11.0	2.0	1.0	0.0	25.0	7.0	2.0	0.0	8.0	0.0	2.0	1.0	0.0	4.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	5.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	1.0	1.0	1.0	0.0	1.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	1.0	0.0	0.0	0.0	0.0	2.0	2.0	3.0	3.0	8782.0	8787.0	8788.0	8788.0	8788.0	8788.0	8788.0	8786.0	8786.0	8786.0	8785.0	6.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	8.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	1.0	52.0	52.0	52.0	1.0	0.0	0.0	1.0	2.0	1.0	1.0	1.0	1.0	1.0	2.0	2.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	2.0	1.0	2.0	1.0	1.0	1.0	1.0	2.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	3.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	3.0	2.0	2.0	2.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	101.0	100.0	100.0	100.0	102.0	102.0	102.0	100.0	100.0	101.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	101.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	101.0	101.0	100.0	99.0	99.0	99.0	99.0	1.0	3.0	1.0	4.0	9.0	1.0	29.0	3.0	1.0	36.0	24.0	6.0	2.0	10.0	1.0	1.0	3.0	0.0
Sample009	Substitutions	16.0	43.0	9.0	9.0	82.0	33.0	13.0	7.0	2.0	11.0	5.0	8.0	10.0	4.0	7.0	5.0	43.0	8.0	4.0	11.0	72.0	13.0	7.0	18.0	4.0	57.0	19.0	10.0	1.0	26.0	4.0	10.0	4.0	7.0	41.0	13.0	20.0	15.0	11.0	10.0	12.0	15.0	9.0	6.0	19.0	7.0	33.0	17.0	19.0	10.0	36.0	53.0	74.0	26.0	37.0	0.0	16.0	22.0	12.0	3.0	31.0	10.0	9.0	2.0	8.0	11.0	10.0	3.0	12.0	56.0	18.0	7.0	7.0	23.0	24.0	2.0	10.0	7.0	12.0	9.0	7.0	20.0	11.0	4.0	9.0	19.0	10.0	18.0	8.0	9.0	25.0	25.0	5.0	15.0	20.0	20.0	21.0	3.0	12.0	12.0	38.0	6.0	6.0	4.0	6.0	6.0	6.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	6.0	5.0	12.0	1.0	13.0	2.0	7.0	14.0	4.0	19.0	4.0	4.0	11.0	6.0	2.0	14.0	4.0	7.0	5.0	6.0	10.0	13.0	3.0	4.0	11.0	4.0	7.0	1.0	20.0	5.0	4.0	19.0	11.0	8.0	6.0	4.0	5.0	13.0	3.0	15.0	6.0	7.0	15.0	17.0	4.0	8.0	25.0	8.0	13.0	20.0	22.0	4.0	11.0	12.0	13.0	12.0	11.0	9.0	3.0	3.0	5.0	13.0	5.0	26.0	7.0	14.0	6.0	14.0	13.0	12.0	50.0	2.0	7.0	21.0	15.0	3.0	23.0	20.0	14.0	10.0	5.0	27.0	9.0	7.0	13.0	10.0	6.0	7.0	9.0	4.0	3.0	29.0	6.0	12.0	4.0	9.0	4.0	11.0	5.0	19.0	5.0	9.0	5.0	12.0	10.0	4.0	14.0	2.0	28.0	9.0	5.0	44.0	6.0	14.0	43.0	8.0	11.0	12.0	7.0	15.0	11.0	3.0	6.0	5.0	7.0	16.0	16.0	26.0	11.0	24.0	22.0	8.0	15.0	26.0	15.0	11.0	9.0	7.0	14.0	6.0	3.0	19.0	19.0	23.0	28.0	102.0
Sample009	All_modifications	56.0	45.0	10.0	9.0	93.0	35.0	14.0	7.0	27.0	18.0	7.0	8.0	22.0	9.0	11.0	7.0	43.0	13.0	9.0	16.0	74.0	13.0	7.0	18.0	4.0	57.0	21.0	15.0	2.0	26.0	4.0	10.0	4.0	7.0	41.0	13.0	20.0	18.0	11.0	10.0	12.0	15.0	9.0	6.0	19.0	7.0	33.0	17.0	19.0	10.0	36.0	53.0	74.0	26.0	38.0	0.0	16.0	22.0	13.0	4.0	32.0	10.0	10.0	2.0	9.0	11.0	10.0	3.0	12.0	56.0	18.0	8.0	7.0	23.0	24.0	4.0	10.0	7.0	12.0	9.0	7.0	20.0	11.0	4.0	9.0	19.0	13.0	18.0	8.0	9.0	25.0	25.0	5.0	15.0	20.0	21.0	21.0	4.0	12.0	12.0	38.0	6.0	8.0	6.0	9.0	9.0	8788.0	8787.0	8788.0	8788.0	8788.0	8788.0	8788.0	8786.0	8786.0	8786.0	8785.0	6.0	2.0	6.0	5.0	12.0	1.0	13.0	2.0	8.0	15.0	5.0	19.0	4.0	4.0	11.0	6.0	10.0	14.0	4.0	7.0	5.0	6.0	10.0	14.0	4.0	5.0	63.0	56.0	59.0	2.0	20.0	5.0	5.0	22.0	13.0	9.0	7.0	5.0	6.0	15.0	5.0	16.0	7.0	8.0	16.0	18.0	5.0	9.0	27.0	9.0	15.0	21.0	23.0	5.0	12.0	14.0	14.0	13.0	12.0	10.0	4.0	4.0	6.0	16.0	6.0	27.0	8.0	15.0	7.0	15.0	14.0	13.0	53.0	4.0	9.0	23.0	115.0	103.0	123.0	120.0	114.0	110.0	105.0	127.0	109.0	108.0	113.0	110.0	106.0	109.0	111.0	106.0	103.0	129.0	107.0	112.0	104.0	109.0	104.0	111.0	105.0	119.0	105.0	109.0	105.0	112.0	110.0	104.0	114.0	102.0	128.0	109.0	105.0	144.0	106.0	115.0	143.0	108.0	111.0	112.0	107.0	115.0	111.0	104.0	107.0	105.0	106.0	115.0	115.0	125.0	12.0	27.0	23.0	13.0	25.0	28.0	46.0	15.0	10.0	46.0	41.0	12.0	5.0	29.0	20.0	24.0	31.0	102.0
Sample007	Insertions	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	1.0	3.0	2.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	2.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	2.0	1.0	1.0	1.0	0.0	3.0	3.0	1.0	2.0	1.0	0.0	0.0	0.0	0.0
Sample007	Insertions_Left	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	1.0	2.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	1.0	0.0	0.0	3.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0
Sample007	Deletions	38.0	1.0	0.0	0.0	11.0	6.0	4.0	0.0	28.0	9.0	1.0	0.0	13.0	1.0	0.0	3.0	0.0	3.0	0.0	1.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	11.0	0.0	0.0	0.0	2.0	2.0	3.0	2.0	2.0	2.0	2.0	3.0	2.0	2.0	2.0	2.0	2.0	2.0	2.0	2.0	2.0	4.0	4.0	5.0	4.0	4.0	4.0	5.0	5.0	5.0	5.0	9033.0	9041.0	9042.0	9044.0	9038.0	9038.0	9036.0	9035.0	9035.0	9035.0	9033.0	5.0	3.0	0.0	0.0	1.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	6.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	59.0	59.0	59.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	2.0	2.0	1.0	1.0	1.0	2.0	1.0	1.0	2.0	1.0	1.0	1.0	1.0	3.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	2.0	2.0	2.0	2.0	74.0	74.0	74.0	74.0	74.0	74.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	74.0	74.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	76.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	77.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	75.0	74.0	74.0	74.0	74.0	2.0	4.0	5.0	4.0	11.0	2.0	35.0	2.0	1.0	27.0	12.0	4.0	11.0	15.0	1.0	1.0	2.0	0.0
Sample007	Substitutions	9.0	41.0	6.0	11.0	80.0	41.0	9.0	7.0	4.0	11.0	3.0	7.0	8.0	5.0	12.0	8.0	53.0	6.0	10.0	5.0	55.0	19.0	7.0	10.0	5.0	61.0	15.0	9.0	2.0	27.0	7.0	10.0	5.0	7.0	49.0	14.0	11.0	19.0	8.0	12.0	9.0	17.0	10.0	4.0	21.0	9.0	24.0	11.0	19.0	4.0	39.0	66.0	61.0	20.0	39.0	7.0	7.0	15.0	14.0	2.0	36.0	5.0	11.0	8.0	10.0	15.0	9.0	7.0	17.0	54.0	15.0	15.0	6.0	27.0	19.0	5.0	13.0	10.0	4.0	13.0	7.0	15.0	10.0	5.0	14.0	15.0	11.0	12.0	13.0	8.0	12.0	17.0	8.0	19.0	15.0	16.0	16.0	7.0	14.0	7.0	38.0	3.0	5.0	1.0	7.0	10.0	4.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	3.0	8.0	11.0	3.0	10.0	3.0	6.0	17.0	4.0	15.0	2.0	5.0	6.0	5.0	4.0	7.0	4.0	7.0	7.0	4.0	4.0	11.0	0.0	9.0	26.0	11.0	8.0	8.0	14.0	4.0	10.0	22.0	9.0	6.0	3.0	8.0	4.0	9.0	4.0	23.0	8.0	1.0	9.0	20.0	2.0	4.0	36.0	2.0	23.0	20.0	18.0	5.0	9.0	16.0	16.0	17.0	25.0	7.0	3.0	1.0	8.0	19.0	8.0	35.0	16.0	13.0	13.0	8.0	12.0	11.0	84.0	5.0	13.0	26.0	12.0	2.0	26.0	21.0	14.0	8.0	15.0	28.0	11.0	5.0	24.0	12.0	3.0	8.0	11.0	4.0	8.0	35.0	6.0	9.0	3.0	9.0	2.0	5.0	4.0	24.0	6.0	3.0	8.0	12.0	4.0	2.0	11.0	6.0	47.0	8.0	6.0	29.0	6.0	13.0	49.0	6.0	15.0	15.0	15.0	13.0	7.0	8.0	3.0	14.0	0.0	18.0	14.0	16.0	15.0	14.0	17.0	7.0	6.0	19.0	13.0	6.0	5.0	8.0	21.0	5.0	12.0	10.0	15.0	15.0	28.0	90.0
Sample007	All_modifications	47.0	42.0	6.0	11.0	91.0	47.0	14.0	8.0	33.0	23.0	6.0	7.0	21.0	6.0	12.0	12.0	54.0	9.0	12.0	8.0	55.0	20.0	7.0	10.0	5.0	61.0	15.0	10.0	2.0	27.0	7.0	10.0	5.0	7.0	49.0	14.0	11.0	21.0	8.0	12.0	9.0	17.0	10.0	4.0	22.0	9.0	24.0	11.0	19.0	4.0	39.0	66.0	61.0	20.0	39.0	7.0	8.0	15.0	16.0	2.0	36.0	5.0	11.0	8.0	10.0	15.0	9.0	7.0	17.0	55.0	15.0	15.0	6.0	27.0	19.0	16.0	13.0	10.0	4.0	15.0	9.0	18.0	12.0	7.0	16.0	17.0	14.0	14.0	15.0	10.0	14.0	19.0	10.0	21.0	17.0	18.0	20.0	11.0	19.0	11.0	42.0	7.0	10.0	6.0	12.0	15.0	9037.0	9041.0	9043.0	9045.0	9038.0	9038.0	9036.0	9035.0	9035.0	9035.0	9033.0	5.0	3.0	3.0	8.0	12.0	3.0	10.0	3.0	7.0	17.0	4.0	15.0	2.0	5.0	6.0	5.0	11.0	8.0	4.0	7.0	7.0	4.0	4.0	11.0	0.0	9.0	85.0	70.0	67.0	9.0	15.0	5.0	11.0	24.0	11.0	7.0	4.0	9.0	5.0	10.0	5.0	24.0	10.0	3.0	10.0	21.0	3.0	6.0	37.0	3.0	25.0	21.0	19.0	6.0	10.0	19.0	17.0	18.0	26.0	8.0	4.0	2.0	9.0	20.0	9.0	36.0	17.0	14.0	14.0	9.0	13.0	12.0	86.0	7.0	15.0	28.0	86.0	76.0	100.0	95.0	88.0	82.0	90.0	103.0	86.0	80.0	99.0	87.0	78.0	83.0	86.0	79.0	82.0	109.0	81.0	84.0	78.0	84.0	77.0	80.0	79.0	99.0	81.0	78.0	83.0	87.0	79.0	78.0	86.0	81.0	122.0	83.0	81.0	104.0	81.0	90.0	124.0	81.0	90.0	90.0	90.0	88.0	82.0	83.0	78.0	89.0	74.0	92.0	88.0	90.0	17.0	18.0	22.0	12.0	19.0	22.0	49.0	9.0	6.0	38.0	36.0	10.0	25.0	26.0	16.0	16.0	30.0	90.0
Sample004	Insertions	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	3.0	2.0	1.0	3.0	2.0	1.0	1.0	0.0	6.0	6.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	3.0	3.0	0.0	6.0	7.0	1.0	1.0	1.0	0.0	0.0	0.0	0.0
Sample004	Insertions_Left	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	2.0	0.0	1.0	2.0	0.0	1.0	0.0	0.0	6.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	3.0	0.0	0.0	6.0	1.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0
Sample004	Deletions	69.0	0.0	0.0	0.0	14.0	6.0	8.0	1.0	30.0	13.0	2.0	0.0	13.0	2.0	4.0	1.0	1.0	5.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	8.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	2.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	2.0	0.0	1.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	20.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	43.0	44.0	44.0	1.0	0.0	0.0	0.0	1.0	0.0	1.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	2.0	2.0	2.0	4.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	4.0	2.0	3.0	3.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	2.0	2.0	2.0	2.0	107.0	107.0	107.0	107.0	107.0	107.0	111.0	111.0	111.0	112.0	111.0	111.0	111.0	113.0	113.0	113.0	111.0	111.0	111.0	111.0	111.0	111.0	111.0	111.0	111.0	111.0	111.0	111.0	110.0	111.0	111.0	110.0	110.0	110.0	110.0	110.0	110.0	109.0	109.0	109.0	109.0	110.0	110.0	110.0	110.0	110.0	110.0	110.0	110.0	110.0	109.0	109.0	109.0	109.0	4.0	6.0	6.0	7.0	12.0	4.0	33.0	1.0	1.0	44.0	15.0	6.0	3.0	10.0	0.0	0.0	1.0	0.0
Sample004	Substitutions	17.0	68.0	9.0	1.0	102.0	43.0	9.0	12.0	5.0	13.0	8.0	7.0	15.0	6.0	14.0	6.0	58.0	7.0	12.0	12.0	76.0	18.0	14.0	20.0	7.0	67.0	31.0	16.0	6.0	37.0	5.0	18.0	11.0	7.0	54.0	22.0	18.0	21.0	14.0	16.0	19.0	26.0	22.0	4.0	34.0	15.0	40.0	11.0	25.0	12.0	51.0	89.0	95.0	28.0	55.0	9.0	21.0	30.0	23.0	4.0	67.0	14.0	12.0	6.0	8.0	9.0	12.0	5.0	18.0	80.0	38.0	10.0	13.0	46.0	27.0	10.0	10.0	18.0	11.0	22.0	10.0	19.0	19.0	11.0	14.0	31.0	15.0	36.0	22.0	9.0	22.0	30.0	3.0	23.0	40.0	27.0	32.0	13.0	11.0	12.0	58.0	5.0	17.0	8.0	21.0	6.0	26.0	5.0	50.0	13.0	10.0	12.0	6.0	8.0	6.0	10.0	13.0	5.0	0.0	7.0	12.0	7.0	5.0	15.0	3.0	3.0	18.0	5.0	35.0	2.0	10.0	9.0	3.0	10.0	13.0	9.0	13.0	6.0	9.0	14.0	11.0	3.0	7.0	32.0	10.0	11.0	10.0	21.0	11.0	11.0	16.0	14.0	19.0	7.0	23.0	2.0	15.0	4.0	17.0	12.0	9.0	39.0	17.0	5.0	5.0	36.0	10.0	12.0	16.0	18.0	8.0	14.0	23.0	10.0	8.0	24.0	11.0	5.0	5.0	10.0	23.0	12.0	45.0	14.0	11.0	12.0	17.0	13.0	19.0	77.0	5.0	4.0	22.0	13.0	5.0	28.0	16.0	9.0	9.0	12.0	32.0	7.0	7.0	17.0	6.0	5.0	8.0	13.0	6.0	10.0	36.0	6.0	12.0	5.0	11.0	2.0	13.0	2.0	26.0	3.0	7.0	10.0	17.0	13.0	6.0	15.0	7.0	42.0	8.0	12.0	37.0	15.0	16.0	61.0	7.0	14.0	15.0	16.0	12.0	6.0	10.0	2.0	11.0	7.0	21.0	12.0	16.0	13.0	21.0	32.0	7.0	9.0	15.0	10.0	5.0	17.0	14.0	23.0	10.0	14.0	15.0	23.0	20.0	42.0	111.0
Sample004	All_modifications	86.0	68.0	9.0	1.0	116.0	49.0	17.0	13.0	35.0	27.0	13.0	9.0	29.0	11.0	20.0	8.0	60.0	12.0	19.0	18.0	76.0	18.0	14.0	20.0	7.0	67.0	32.0	24.0	7.0	37.0	5.0	18.0	11.0	7.0	54.0	22.0	18.0	23.0	14.0	16.0	19.0	28.0	22.0	4.0	35.0	15.0	40.0	11.0	25.0	12.0	51.0	89.0	95.0	28.0	56.0	9.0	21.0	30.0	24.0	4.0	67.0	14.0	14.0	6.0	9.0	9.0	12.0	6.0	18.0	80.0	38.0	10.0	13.0	46.0	27.0	11.0	10.0	18.0	11.0	22.0	10.0	19.0	19.0	11.0	14.0	31.0	15.0	36.0	22.0	9.0	22.0	30.0	3.0	23.0	40.0	28.0	32.0	14.0	11.0	12.0	58.0	5.0	17.0	8.0	21.0	6.0	26.0	6.0	51.0	13.0	12.0	12.0	6.0	8.0	6.0	10.0	13.0	5.0	0.0	7.0	12.0	7.0	5.0	15.0	3.0	3.0	18.0	6.0	36.0	2.0	10.0	9.0	3.0	31.0	14.0	9.0	13.0	6.0	9.0	14.0	11.0	3.0	7.0	75.0	54.0	55.0	11.0	21.0	11.0	11.0	17.0	14.0	20.0	7.0	23.0	2.0	16.0	5.0	17.0	12.0	9.0	41.0	19.0	7.0	9.0	37.0	11.0	13.0	17.0	19.0	9.0	15.0	27.0	12.0	11.0	27.0	12.0	6.0	6.0	11.0	24.0	13.0	46.0	15.0	12.0	13.0	18.0	14.0	20.0	79.0	7.0	6.0	24.0	120.0	112.0	135.0	123.0	116.0	116.0	123.0	143.0	118.0	119.0	128.0	117.0	116.0	121.0	126.0	120.0	122.0	147.0	117.0	123.0	116.0	122.0	113.0	124.0	113.0	137.0	114.0	118.0	120.0	128.0	124.0	116.0	125.0	117.0	152.0	118.0	122.0	146.0	124.0	125.0	170.0	117.0	124.0	125.0	126.0	122.0	116.0	120.0	112.0	121.0	116.0	130.0	121.0	125.0	17.0	27.0	38.0	14.0	21.0	19.0	46.0	9.0	18.0	64.0	45.0	17.0	18.0	26.0	23.0	20.0	43.0	111.0
Sample003	Insertions	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	2.0	2.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	4.0	4.0	0.0	0.0	0.0	0.0	1.0	3.0	19.0	17.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	6.0	7.0	1.0	2.0	2.0	0.0	1.0	1.0	8.0	8.0	0.0	2.0	9.0	7.0	2.0	3.0	11.0	2602.0	2604.0	29.0	27.0	24.0	24.0	16.0	10.0	5.0	5.0	4.0	0.0	0.0	2.0	2.0	0.0	2.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	2.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	4.0	4.0	0.0	3.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	6.0	6.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0
Sample003	Insertions_Left	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	1.0	0.0	2.0	0.0	0.0	2.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	4.0	0.0	0.0	0.0	0.0	0.0	1.0	2.0	17.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	6.0	1.0	0.0	2.0	0.0	0.0	1.0	0.0	8.0	0.0	0.0	2.0	7.0	0.0	2.0	1.0	10.0	2592.0	12.0	17.0	10.0	14.0	10.0	6.0	4.0	1.0	4.0	0.0	0.0	0.0	2.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	4.0	0.0	0.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	6.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	2.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0
Sample003	Deletions	53.0	1.0	0.0	1.0	8.0	6.0	7.0	0.0	29.0	9.0	4.0	1.0	10.0	2.0	4.0	5.0	5.0	3.0	0.0	1.0	1.0	1.0	1.0	3.0	3.0	10.0	13.0	18.0	30.0	35.0	43.0	56.0	56.0	60.0	68.0	76.0	79.0	84.0	80.0	83.0	86.0	87.0	89.0	89.0	93.0	91.0	90.0	91.0	98.0	105.0	106.0	106.0	106.0	111.0	112.0	114.0	111.0	111.0	119.0	119.0	114.0	119.0	119.0	129.0	126.0	132.0	133.0	137.0	150.0	151.0	181.0	190.0	186.0	193.0	196.0	207.0	194.0	196.0	192.0	249.0	250.0	253.0	254.0	256.0	269.0	272.0	276.0	298.0	309.0	307.0	327.0	332.0	334.0	445.0	469.0	480.0	497.0	549.0	567.0	617.0	828.0	848.0	1084.0	1158.0	1211.0	1293.0	2014.0	2246.0	3058.0	3862.0	3153.0	2290.0	2014.0	1698.0	1553.0	1458.0	1399.0	900.0	653.0	534.0	392.0	369.0	351.0	340.0	328.0	342.0	326.0	312.0	302.0	288.0	282.0	275.0	268.0	272.0	250.0	225.0	220.0	218.0	213.0	220.0	217.0	208.0	203.0	270.0	269.0	264.0	196.0	191.0	172.0	167.0	161.0	157.0	155.0	149.0	158.0	155.0	147.0	148.0	146.0	129.0	127.0	127.0	121.0	118.0	118.0	118.0	101.0	102.0	98.0	95.0	91.0	91.0	93.0	89.0	89.0	89.0	80.0	76.0	74.0	75.0	75.0	82.0	82.0	82.0	80.0	80.0	80.0	80.0	69.0	70.0	70.0	70.0	70.0	190.0	190.0	190.0	190.0	184.0	175.0	160.0	159.0	156.0	153.0	153.0	152.0	150.0	151.0	148.0	148.0	146.0	143.0	143.0	137.0	137.0	129.0	129.0	130.0	130.0	129.0	129.0	128.0	128.0	128.0	127.0	129.0	127.0	127.0	127.0	127.0	127.0	127.0	127.0	129.0	127.0	127.0	127.0	127.0	127.0	127.0	127.0	127.0	127.0	127.0	126.0	126.0	129.0	126.0	1.0	4.0	0.0	1.0	9.0	1.0	44.0	0.0	0.0	36.0	14.0	11.0	4.0	11.0	0.0	2.0	3.0	0.0
Sample003	Substitutions	13.0	51.0	3.0	9.0	93.0	49.0	8.0	4.0	5.0	11.0	10.0	17.0	6.0	3.0	13.0	7.0	55.0	5.0	9.0	9.0	65.0	19.0	11.0	13.0	15.0	76.0	25.0	12.0	2.0	47.0	4.0	20.0	10.0	11.0	62.0	14.0	15.0	26.0	13.0	12.0	24.0	23.0	9.0	8.0	29.0	12.0	52.0	11.0	27.0	15.0	42.0	72.0	87.0	34.0	43.0	8.0	20.0	36.0	21.0	6.0	46.0	14.0	24.0	16.0	13.0	13.0	21.0	9.0	19.0	58.0	39.0	17.0	14.0	33.0	34.0	21.0	22.0	34.0	34.0	50.0	21.0	40.0	21.0	45.0	24.0	22.0	21.0	55.0	21.0	38.0	44.0	52.0	43.0	68.0	31.0	60.0	53.0	29.0	19.0	60.0	67.0	32.0	74.0	50.0	70.0	64.0	202.0	146.0	297.0	275.0	175.0	149.0	122.0	86.0	47.0	48.0	23.0	20.0	22.0	31.0	34.0	29.0	7.0	28.0	9.0	5.0	22.0	4.0	28.0	6.0	5.0	8.0	8.0	9.0	12.0	18.0	12.0	17.0	18.0	21.0	25.0	14.0	18.0	18.0	7.0	29.0	9.0	30.0	8.0	10.0	20.0	41.0	15.0	9.0	25.0	10.0	12.0	3.0	22.0	20.0	7.0	44.0	16.0	8.0	12.0	45.0	10.0	11.0	28.0	17.0	11.0	11.0	23.0	8.0	21.0	24.0	19.0	12.0	4.0	7.0	29.0	4.0	46.0	11.0	12.0	17.0	14.0	19.0	11.0	51.0	4.0	11.0	19.0	11.0	5.0	25.0	31.0	12.0	12.0	14.0	22.0	13.0	7.0	25.0	14.0	10.0	7.0	15.0	1.0	8.0	32.0	8.0	10.0	3.0	12.0	6.0	8.0	2.0	33.0	12.0	8.0	9.0	16.0	19.0	11.0	20.0	6.0	37.0	8.0	8.0	34.0	6.0	19.0	58.0	14.0	7.0	9.0	12.0	18.0	10.0	6.0	6.0	9.0	3.0	18.0	23.0	15.0	12.0	14.0	26.0	5.0	15.0	26.0	13.0	12.0	9.0	7.0	24.0	6.0	14.0	7.0	25.0	19.0	44.0	92.0
Sample003	All_modifications	66.0	52.0	3.0	10.0	101.0	55.0	16.0	5.0	34.0	20.0	15.0	19.0	18.0	7.0	17.0	14.0	62.0	8.0	9.0	11.0	67.0	20.0	12.0	16.0	18.0	86.0	38.0	30.0	32.0	82.0	47.0	76.0	66.0	71.0	130.0	90.0	94.0	110.0	93.0	97.0	112.0	110.0	98.0	97.0	122.0	103.0	142.0	102.0	125.0	120.0	148.0	178.0	193.0	145.0	155.0	122.0	131.0	147.0	140.0	125.0	160.0	133.0	143.0	145.0	139.0	145.0	154.0	146.0	169.0	209.0	220.0	207.0	200.0	230.0	234.0	228.0	216.0	230.0	226.0	300.0	274.0	312.0	292.0	301.0	293.0	295.0	298.0	353.0	330.0	345.0	371.0	390.0	384.0	514.0	502.0	542.0	550.0	579.0	587.0	685.0	903.0	880.0	1160.0	1217.0	1288.0	1359.0	2219.0	2403.0	5957.0	6741.0	3357.0	2466.0	2160.0	1808.0	1616.0	1516.0	1427.0	925.0	679.0	565.0	426.0	400.0	360.0	368.0	339.0	349.0	348.0	316.0	330.0	294.0	287.0	283.0	276.0	281.0	262.0	243.0	232.0	235.0	231.0	241.0	242.0	222.0	223.0	290.0	276.0	294.0	206.0	221.0	180.0	177.0	181.0	198.0	170.0	158.0	183.0	165.0	159.0	151.0	168.0	149.0	134.0	172.0	138.0	130.0	134.0	163.0	114.0	116.0	126.0	112.0	102.0	102.0	116.0	97.0	110.0	113.0	99.0	88.0	78.0	82.0	104.0	86.0	128.0	93.0	92.0	97.0	94.0	99.0	80.0	121.0	74.0	81.0	90.0	202.0	195.0	215.0	221.0	196.0	187.0	174.0	181.0	169.0	160.0	178.0	166.0	160.0	158.0	163.0	149.0	154.0	175.0	151.0	147.0	140.0	141.0	135.0	138.0	132.0	162.0	141.0	136.0	137.0	144.0	146.0	140.0	147.0	133.0	164.0	135.0	135.0	161.0	133.0	148.0	185.0	141.0	134.0	136.0	139.0	145.0	137.0	133.0	133.0	142.0	135.0	144.0	152.0	141.0	13.0	18.0	26.0	6.0	24.0	27.0	57.0	13.0	10.0	45.0	40.0	17.0	18.0	19.0	26.0	21.0	47.0	92.0
Sample006	Insertions	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	2.0	2.0	2.0	3.0	1.0	1.0	1.0	2.0	3.0	2.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	4.0	4.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	3.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	4.0	4.0	1.0	1.0	1.0	1.0	7.0	11.0	4.0	1.0	18.0	19.0	6.0	4.0	8.0	18.0	1514.0	1514.0	19.0	16.0	18.0	20.0	22.0	13.0	9.0	10.0	1.0	1.0	1.0	4.0	7.0	3.0	0.0	1.0	1.0	0.0	3.0	3.0	0.0	6.0	6.0	0.0	2.0	2.0	0.0	2.0	2.0	0.0	0.0	2.0	4.0	2.0	0.0	14.0	16.0	2.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	2.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	4.0	4.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	6.0	9.0	3.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	5.0	6.0	1.0	0.0	1.0	1.0	0.0	3.0	3.0	1.0	2.0	2.0	1.0	0.0	0.0	0.0
Sample006	Insertions_Left	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	2.0	0.0	2.0	1.0	0.0	1.0	0.0	2.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	4.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	4.0	0.0	1.0	0.0	1.0	0.0	7.0	4.0	0.0	1.0	17.0	2.0	4.0	0.0	8.0	10.0	1504.0	10.0	9.0	7.0	11.0	9.0	13.0	0.0	9.0	1.0	0.0	1.0	0.0	4.0	3.0	0.0	0.0	1.0	0.0	0.0	3.0	0.0	0.0	6.0	0.0	0.0	2.0	0.0	0.0	2.0	0.0	0.0	0.0	2.0	2.0	0.0	0.0	14.0	2.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	4.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	6.0	3.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	5.0	1.0	0.0	0.0	1.0	0.0	0.0	3.0	0.0	1.0	1.0	1.0	0.0	0.0	0.0	0.0
Sample006	Deletions	53.0	1.0	0.0	0.0	10.0	9.0	6.0	0.0	29.0	9.0	5.0	1.0	17.0	1.0	4.0	3.0	2.0	4.0	1.0	1.0	7.0	7.0	10.0	11.0	17.0	25.0	28.0	34.0	45.0	51.0	61.0	65.0	65.0	70.0	81.0	90.0	88.0	94.0	95.0	100.0	101.0	102.0	99.0	102.0	106.0	111.0	110.0	111.0	125.0	132.0	139.0	143.0	144.0	150.0	156.0	151.0	156.0	155.0	156.0	152.0	149.0	150.0	151.0	170.0	187.0	185.0	204.0	204.0	227.0	228.0	246.0	279.0	284.0	301.0	313.0	337.0	326.0	333.0	335.0	430.0	441.0	447.0	450.0	447.0	451.0	451.0	454.0	499.0	502.0	507.0	539.0	545.0	551.0	700.0	768.0	804.0	824.0	859.0	886.0	965.0	1312.0	1344.0	1697.0	1766.0	1826.0	1945.0	2907.0	3181.0	4118.0	5188.0	4389.0	3407.0	3043.0	2632.0	2380.0	2207.0	2127.0	1424.0	1004.0	826.0	625.0	571.0	533.0	504.0	481.0	468.0	448.0	431.0	424.0	425.0	405.0	392.0	387.0	390.0	377.0	350.0	343.0	335.0	334.0	313.0	311.0	311.0	308.0	365.0	362.0	356.0	291.0	289.0	256.0	254.0	244.0	246.0	235.0	236.0	235.0	235.0	231.0	229.0	225.0	225.0	224.0	225.0	223.0	211.0	200.0	195.0	196.0	197.0	196.0	190.0	167.0	155.0	155.0	151.0	157.0	157.0	151.0	132.0	128.0	118.0	104.0	103.0	98.0	96.0	84.0	94.0	86.0	83.0	67.0	62.0	62.0	62.0	50.0	156.0	153.0	147.0	139.0	138.0	138.0	138.0	138.0	138.0	138.0	138.0	132.0	132.0	141.0	135.0	135.0	133.0	126.0	125.0	125.0	125.0	125.0	125.0	125.0	126.0	125.0	120.0	120.0	109.0	109.0	109.0	110.0	109.0	109.0	108.0	108.0	108.0	108.0	108.0	109.0	108.0	108.0	110.0	110.0	110.0	110.0	110.0	110.0	110.0	110.0	110.0	108.0	109.0	108.0	2.0	6.0	5.0	4.0	5.0	2.0	34.0	1.0	0.0	46.0	23.0	8.0	9.0	20.0	1.0	0.0	1.0	0.0
Sample006	Substitutions	12.0	55.0	11.0	7.0	92.0	56.0	14.0	9.0	2.0	11.0	9.0	15.0	14.0	3.0	6.0	8.0	56.0	10.0	4.0	12.0	71.0	11.0	13.0	22.0	6.0	75.0	23.0	14.0	4.0	34.0	6.0	18.0	7.0	5.0	68.0	33.0	24.0	24.0	11.0	21.0	24.0	26.0	12.0	9.0	36.0	13.0	42.0	18.0	30.0	10.0	44.0	93.0	84.0	23.0	57.0	14.0	24.0	54.0	16.0	9.0	45.0	13.0	21.0	22.0	10.0	20.0	21.0	18.0	34.0	86.0	42.0	20.0	28.0	44.0	24.0	26.0	33.0	14.0	22.0	52.0	23.0	50.0	22.0	31.0	24.0	30.0	20.0	42.0	43.0	45.0	31.0	58.0	40.0	56.0	35.0	36.0	41.0	14.0	49.0	68.0	108.0	55.0	53.0	79.0	82.0	70.0	217.0	131.0	311.0	247.0	172.0	188.0	128.0	122.0	113.0	72.0	66.0	22.0	40.0	45.0	51.0	26.0	19.0	30.0	30.0	21.0	26.0	28.0	43.0	17.0	18.0	14.0	24.0	9.0	26.0	16.0	28.0	25.0	15.0	29.0	29.0	19.0	22.0	37.0	19.0	19.0	21.0	22.0	19.0	21.0	18.0	19.0	21.0	10.0	36.0	12.0	15.0	3.0	33.0	24.0	19.0	37.0	37.0	14.0	10.0	58.0	9.0	14.0	24.0	11.0	20.0	25.0	34.0	16.0	15.0	26.0	8.0	14.0	3.0	12.0	22.0	20.0	39.0	13.0	12.0	18.0	19.0	16.0	23.0	72.0	21.0	15.0	35.0	19.0	15.0	34.0	23.0	17.0	6.0	34.0	56.0	13.0	17.0	16.0	11.0	12.0	10.0	11.0	5.0	9.0	33.0	15.0	20.0	6.0	21.0	7.0	21.0	15.0	29.0	4.0	12.0	8.0	13.0	16.0	8.0	10.0	7.0	27.0	6.0	14.0	34.0	7.0	13.0	60.0	6.0	16.0	14.0	8.0	14.0	9.0	6.0	5.0	13.0	4.0	13.0	17.0	27.0	12.0	16.0	29.0	14.0	13.0	23.0	10.0	7.0	11.0	10.0	22.0	7.0	13.0	14.0	25.0	24.0	44.0	95.0
Sample006	All_modifications	65.0	56.0	11.0	7.0	102.0	65.0	21.0	10.0	31.0	20.0	16.0	18.0	33.0	7.0	11.0	12.0	59.0	16.0	8.0	15.0	79.0	18.0	23.0	33.0	23.0	100.0	51.0	48.0	49.0	85.0	67.0	83.0	72.0	75.0	149.0	123.0	113.0	119.0	106.0	121.0	125.0	132.0	115.0	112.0	143.0	124.0	152.0	129.0	155.0	142.0	186.0	239.0	228.0	173.0	213.0	165.0	180.0	209.0	172.0	161.0	194.0	163.0	172.0	192.0	198.0	206.0	225.0	222.0	262.0	315.0	288.0	299.0	312.0	346.0	338.0	363.0	359.0	347.0	357.0	482.0	464.0	497.0	472.0	479.0	476.0	482.0	475.0	541.0	545.0	552.0	570.0	603.0	595.0	760.0	804.0	841.0	866.0	874.0	942.0	1044.0	1424.0	1400.0	1768.0	1864.0	1914.0	2019.0	3132.0	3330.0	5943.0	6949.0	4580.0	3611.0	3189.0	2774.0	2515.0	2292.0	2202.0	1456.0	1045.0	872.0	677.0	601.0	559.0	537.0	511.0	490.0	475.0	459.0	470.0	445.0	423.0	412.0	417.0	399.0	405.0	368.0	371.0	362.0	351.0	342.0	340.0	332.0	334.0	404.0	381.0	389.0	328.0	313.0	275.0	275.0	263.0	266.0	256.0	246.0	271.0	247.0	246.0	232.0	258.0	249.0	243.0	263.0	261.0	225.0	210.0	253.0	205.0	211.0	222.0	203.0	187.0	180.0	189.0	167.0	172.0	183.0	159.0	146.0	135.0	134.0	126.0	123.0	137.0	109.0	96.0	112.0	105.0	99.0	90.0	134.0	83.0	77.0	85.0	175.0	168.0	181.0	162.0	155.0	144.0	172.0	195.0	152.0	161.0	163.0	146.0	144.0	151.0	146.0	141.0	143.0	159.0	140.0	145.0	131.0	146.0	132.0	146.0	141.0	154.0	124.0	132.0	117.0	122.0	125.0	118.0	119.0	116.0	135.0	114.0	122.0	142.0	115.0	122.0	168.0	114.0	126.0	124.0	118.0	124.0	119.0	116.0	115.0	123.0	114.0	121.0	126.0	135.0	14.0	22.0	39.0	24.0	19.0	25.0	45.0	9.0	11.0	59.0	48.0	16.0	24.0	36.0	27.0	24.0	45.0	95.0
Sample005	Insertions	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	3.0	4.0	2.0	1.0	3.0	4.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	4.0	3.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	3.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	2.0	2.0	1.0	1.0	1.0	1.0	0.0	0.0	6.0	6.0	0.0	0.0	0.0	0.0	2.0	2.0	3.0	3.0	1.0	1.0	2.0	5.0	7.0	4.0	5.0	7.0	6.0	5.0	6.0	18.0	14.0	3.0	3.0	14.0	43.0	1596.0	1571.0	24.0	27.0	22.0	28.0	17.0	5.0	4.0	4.0	2.0	0.0	1.0	7.0	6.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	2.0	6.0	5.0	3.0	3.0	0.0	0.0	0.0	0.0	5.0	5.0	1.0	1.0	0.0	11.0	16.0	5.0	5.0	5.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	5.0	5.0	0.0	0.0	1.0	1.0	6.0	6.0	0.0	0.0	2.0	2.0	0.0	5.0	5.0	1.0	1.0	0.0	5.0	5.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	3.0	3.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	2.0	0.0	3.0	4.0	1.0	3.0	4.0	1.0	0.0	0.0	0.0
Sample005	Insertions_Left	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	3.0	1.0	1.0	0.0	3.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	2.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	2.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	2.0	0.0	1.0	0.0	1.0	0.0	0.0	0.0	6.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	3.0	0.0	1.0	0.0	2.0	3.0	4.0	0.0	5.0	2.0	4.0	1.0	5.0	13.0	1.0	2.0	1.0	13.0	30.0	1566.0	5.0	19.0	8.0	14.0	14.0	3.0	2.0	2.0	2.0	0.0	0.0	1.0	6.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	5.0	0.0	3.0	0.0	0.0	0.0	0.0	0.0	5.0	0.0	1.0	0.0	0.0	11.0	5.0	0.0	5.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	5.0	0.0	0.0	0.0	1.0	0.0	6.0	0.0	0.0	0.0	2.0	0.0	0.0	5.0	0.0	1.0	0.0	0.0	5.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	3.0	1.0	0.0	3.0	1.0	0.0	0.0	0.0	0.0
Sample005	Deletions	64.0	2.0	0.0	1.0	15.0	3.0	8.0	3.0	31.0	10.0	0.0	1.0	23.0	5.0	4.0	4.0	0.0	6.0	2.0	0.0	5.0	6.0	6.0	6.0	10.0	21.0	33.0	53.0	65.0	68.0	75.0	98.0	102.0	102.0	112.0	119.0	119.0	119.0	125.0	126.0	128.0	128.0	128.0	129.0	135.0	134.0	136.0	137.0	151.0	160.0	162.0	164.0	164.0	164.0	171.0	175.0	175.0	177.0	180.0	183.0	182.0	183.0	186.0	204.0	205.0	202.0	212.0	212.0	245.0	246.0	264.0	287.0	296.0	323.0	336.0	349.0	350.0	355.0	366.0	450.0	456.0	457.0	458.0	462.0	462.0	464.0	473.0	501.0	505.0	511.0	556.0	560.0	564.0	731.0	812.0	859.0	889.0	923.0	952.0	1041.0	1360.0	1370.0	1722.0	1782.0	1871.0	1987.0	2880.0	3144.0	4098.0	4955.0	4195.0	3191.0	2899.0	2547.0	2311.0	2153.0	2101.0	1487.0	1108.0	939.0	725.0	685.0	671.0	635.0	608.0	586.0	563.0	564.0	551.0	543.0	528.0	520.0	508.0	515.0	486.0	472.0	461.0	449.0	444.0	443.0	444.0	435.0	416.0	470.0	467.0	458.0	395.0	393.0	359.0	359.0	352.0	337.0	337.0	334.0	338.0	333.0	326.0	322.0	308.0	299.0	300.0	290.0	290.0	290.0	286.0	279.0	275.0	275.0	271.0	267.0	244.0	242.0	241.0	241.0	239.0	230.0	228.0	198.0	190.0	186.0	169.0	168.0	147.0	148.0	134.0	138.0	138.0	138.0	129.0	112.0	107.0	105.0	102.0	204.0	204.0	204.0	194.0	194.0	188.0	177.0	177.0	171.0	171.0	164.0	152.0	146.0	149.0	145.0	145.0	143.0	122.0	122.0	121.0	121.0	111.0	111.0	111.0	111.0	111.0	111.0	112.0	114.0	112.0	112.0	114.0	108.0	108.0	107.0	107.0	107.0	108.0	107.0	107.0	107.0	107.0	106.0	106.0	106.0	106.0	106.0	106.0	106.0	106.0	106.0	106.0	106.0	106.0	4.0	5.0	5.0	6.0	12.0	5.0	36.0	1.0	1.0	30.0	18.0	12.0	5.0	13.0	1.0	1.0	1.0	0.0
Sample005	Substitutions	11.0	58.0	3.0	6.0	103.0	57.0	13.0	7.0	9.0	9.0	7.0	4.0	10.0	7.0	6.0	6.0	47.0	2.0	8.0	9.0	61.0	21.0	14.0	14.0	6.0	91.0	34.0	15.0	4.0	33.0	10.0	25.0	3.0	7.0	50.0	18.0	24.0	23.0	14.0	18.0	18.0	24.0	12.0	4.0	29.0	9.0	46.0	14.0	32.0	13.0	37.0	103.0	90.0	30.0	42.0	8.0	25.0	33.0	19.0	7.0	39.0	8.0	9.0	20.0	10.0	10.0	9.0	28.0	35.0	79.0	43.0	17.0	29.0	40.0	24.0	13.0	28.0	25.0	20.0	44.0	18.0	33.0	34.0	32.0	25.0	44.0	50.0	60.0	37.0	39.0	37.0	43.0	39.0	54.0	58.0	64.0	57.0	32.0	27.0	61.0	88.0	46.0	78.0	63.0	58.0	68.0	221.0	138.0	364.0	297.0	185.0	182.0	122.0	103.0	92.0	87.0	30.0	29.0	51.0	43.0	55.0	28.0	27.0	26.0	27.0	32.0	28.0	20.0	37.0	24.0	33.0	6.0	9.0	20.0	24.0	18.0	25.0	24.0	15.0	26.0	16.0	7.0	28.0	20.0	16.0	25.0	9.0	24.0	21.0	20.0	27.0	20.0	26.0	19.0	35.0	18.0	24.0	9.0	24.0	16.0	15.0	29.0	29.0	17.0	13.0	34.0	16.0	17.0	27.0	14.0	17.0	16.0	20.0	20.0	17.0	35.0	21.0	13.0	6.0	8.0	22.0	16.0	39.0	18.0	9.0	22.0	24.0	26.0	22.0	69.0	5.0	11.0	19.0	12.0	9.0	27.0	35.0	13.0	8.0	13.0	40.0	25.0	8.0	26.0	25.0	7.0	10.0	12.0	1.0	3.0	40.0	16.0	22.0	5.0	4.0	5.0	15.0	3.0	19.0	8.0	6.0	4.0	13.0	12.0	2.0	11.0	6.0	41.0	4.0	3.0	31.0	4.0	15.0	62.0	9.0	9.0	9.0	10.0	18.0	10.0	10.0	1.0	9.0	6.0	18.0	16.0	20.0	20.0	18.0	14.0	9.0	7.0	11.0	6.0	6.0	9.0	9.0	14.0	5.0	6.0	6.0	21.0	14.0	31.0	71.0
Sample005	All_modifications	75.0	60.0	3.0	7.0	118.0	60.0	21.0	10.0	43.0	23.0	9.0	6.0	36.0	16.0	11.0	10.0	47.0	8.0	10.0	9.0	66.0	27.0	20.0	20.0	16.0	112.0	67.0	68.0	69.0	101.0	85.0	123.0	107.0	113.0	165.0	138.0	143.0	142.0	139.0	144.0	146.0	152.0	140.0	133.0	164.0	143.0	182.0	151.0	183.0	174.0	200.0	267.0	254.0	194.0	216.0	186.0	200.0	210.0	199.0	190.0	221.0	191.0	196.0	225.0	217.0	214.0	221.0	240.0	280.0	326.0	308.0	304.0	325.0	365.0	362.0	363.0	379.0	381.0	387.0	494.0	474.0	496.0	498.0	494.0	487.0	508.0	523.0	563.0	544.0	553.0	596.0	604.0	604.0	787.0	875.0	930.0	950.0	960.0	986.0	1108.0	1453.0	1422.0	1818.0	1859.0	1932.0	2058.0	3115.0	3325.0	6058.0	6823.0	4404.0	3400.0	3043.0	2678.0	2420.0	2245.0	2135.0	1520.0	1161.0	982.0	781.0	720.0	704.0	661.0	635.0	618.0	591.0	584.0	588.0	567.0	562.0	528.0	523.0	540.0	513.0	493.0	486.0	473.0	459.0	469.0	465.0	447.0	445.0	491.0	483.0	494.0	420.0	422.0	385.0	384.0	379.0	357.0	363.0	353.0	373.0	351.0	350.0	331.0	332.0	315.0	320.0	324.0	319.0	307.0	300.0	314.0	297.0	298.0	298.0	281.0	263.0	260.0	261.0	266.0	261.0	266.0	250.0	211.0	201.0	199.0	191.0	184.0	186.0	166.0	143.0	160.0	162.0	164.0	151.0	181.0	112.0	116.0	121.0	216.0	213.0	231.0	229.0	208.0	197.0	190.0	217.0	196.0	179.0	191.0	178.0	153.0	159.0	157.0	149.0	149.0	162.0	138.0	143.0	126.0	115.0	117.0	127.0	114.0	130.0	119.0	118.0	118.0	125.0	124.0	116.0	119.0	115.0	149.0	111.0	110.0	139.0	111.0	122.0	169.0	116.0	115.0	115.0	116.0	124.0	116.0	116.0	107.0	115.0	112.0	124.0	122.0	126.0	24.0	23.0	19.0	15.0	19.0	16.0	44.0	9.0	10.0	42.0	36.0	18.0	14.0	23.0	23.0	15.0	32.0	71.0
Sample002	Insertions	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	2.0	3.0	1.0	1.0	1.0	0.0	0.0	0.0	0.0	4.0	5.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	4.0	4.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	3.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	2.0	0.0	0.0	3.0	3.0	0.0	1.0	1.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	2.0	3.0	6.0	8.0	6.0	2.0	10.0	14.0	6.0	3.0	15.0	33.0	2685.0	2690.0	36.0	19.0	13.0	32.0	30.0	4.0	3.0	7.0	4.0	1.0	8.0	23.0	16.0	0.0	0.0	0.0	4.0	4.0	0.0	0.0	0.0	0.0	1.0	10.0	10.0	1.0	0.0	0.0	4.0	5.0	8.0	7.0	0.0	0.0	0.0	2.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	4.0	4.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	2.0	6.0	6.0	0.0	0.0	0.0	7.0	8.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	16.0	16.0	0.0	0.0	2.0	2.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	7.0	7.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	7.0	7.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	2.0	2.0	0.0	2.0	2.0	0.0	0.0	0.0	0.0
Sample002	Insertions_Left	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	2.0	1.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	4.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	4.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	3.0	0.0	0.0	1.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	4.0	4.0	2.0	0.0	10.0	4.0	2.0	1.0	14.0	19.0	2666.0	24.0	12.0	7.0	6.0	26.0	4.0	0.0	3.0	4.0	0.0	1.0	7.0	16.0	0.0	0.0	0.0	0.0	4.0	0.0	0.0	0.0	0.0	0.0	1.0	9.0	1.0	0.0	0.0	0.0	4.0	1.0	7.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	4.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	6.0	0.0	0.0	0.0	0.0	7.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	16.0	0.0	0.0	0.0	2.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	7.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	7.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0
Sample002	Deletions	55.0	2.0	1.0	0.0	15.0	3.0	4.0	1.0	29.0	11.0	1.0	0.0	19.0	3.0	3.0	4.0	3.0	5.0	2.0	0.0	2.0	4.0	4.0	8.0	8.0	11.0	16.0	35.0	46.0	50.0	54.0	61.0	63.0	63.0	68.0	70.0	75.0	78.0	76.0	77.0	80.0	81.0	80.0	86.0	94.0	95.0	95.0	100.0	106.0	116.0	121.0	123.0	124.0	130.0	135.0	137.0	139.0	147.0	147.0	148.0	146.0	145.0	142.0	149.0	153.0	155.0	165.0	173.0	195.0	197.0	209.0	221.0	226.0	242.0	248.0	257.0	256.0	259.0	260.0	319.0	329.0	330.0	328.0	334.0	349.0	357.0	360.0	376.0	388.0	396.0	410.0	421.0	419.0	516.0	569.0	602.0	612.0	642.0	662.0	712.0	957.0	969.0	1278.0	1333.0	1403.0	1509.0	2308.0	2565.0	3575.0	4523.0	3649.0	2534.0	2234.0	1891.0	1743.0	1611.0	1559.0	1052.0	745.0	615.0	476.0	444.0	414.0	406.0	391.0	381.0	351.0	350.0	336.0	326.0	318.0	304.0	295.0	300.0	280.0	260.0	257.0	252.0	249.0	246.0	245.0	223.0	217.0	258.0	256.0	254.0	207.0	207.0	174.0	171.0	163.0	157.0	152.0	149.0	149.0	149.0	142.0	141.0	140.0	132.0	126.0	122.0	119.0	110.0	102.0	111.0	107.0	102.0	101.0	101.0	94.0	94.0	94.0	92.0	93.0	93.0	91.0	65.0	65.0	62.0	59.0	58.0	57.0	48.0	45.0	45.0	45.0	45.0	45.0	46.0	46.0	46.0	45.0	129.0	122.0	116.0	118.0	118.0	118.0	106.0	106.0	106.0	107.0	106.0	106.0	106.0	108.0	104.0	105.0	101.0	97.0	96.0	96.0	96.0	96.0	96.0	103.0	96.0	96.0	96.0	96.0	97.0	97.0	98.0	99.0	98.0	98.0	98.0	98.0	98.0	98.0	98.0	99.0	98.0	98.0	98.0	98.0	98.0	96.0	96.0	96.0	96.0	96.0	95.0	95.0	96.0	95.0	5.0	5.0	7.0	8.0	7.0	4.0	39.0	3.0	3.0	36.0	21.0	12.0	8.0	17.0	3.0	3.0	3.0	0.0
Sample002	Substitutions	25.0	57.0	4.0	7.0	106.0	52.0	11.0	1.0	9.0	5.0	6.0	11.0	9.0	2.0	11.0	13.0	65.0	6.0	17.0	11.0	54.0	11.0	8.0	11.0	12.0	59.0	34.0	10.0	2.0	21.0	10.0	30.0	9.0	6.0	75.0	22.0	16.0	28.0	18.0	18.0	14.0	25.0	15.0	6.0	20.0	7.0	39.0	15.0	26.0	11.0	58.0	107.0	81.0	36.0	48.0	2.0	18.0	31.0	17.0	4.0	36.0	11.0	25.0	11.0	16.0	14.0	26.0	12.0	18.0	51.0	35.0	27.0	17.0	35.0	24.0	20.0	10.0	23.0	15.0	33.0	10.0	34.0	18.0	21.0	25.0	23.0	22.0	53.0	30.0	22.0	27.0	32.0	22.0	52.0	33.0	58.0	36.0	40.0	48.0	43.0	65.0	29.0	34.0	52.0	58.0	75.0	201.0	155.0	305.0	259.0	179.0	166.0	153.0	118.0	74.0	54.0	19.0	19.0	23.0	31.0	38.0	21.0	19.0	30.0	8.0	26.0	28.0	20.0	35.0	9.0	25.0	23.0	17.0	15.0	20.0	15.0	24.0	32.0	17.0	12.0	15.0	10.0	26.0	46.0	16.0	37.0	17.0	47.0	22.0	18.0	20.0	23.0	31.0	18.0	37.0	23.0	18.0	17.0	23.0	29.0	17.0	53.0	34.0	23.0	27.0	53.0	13.0	12.0	27.0	27.0	19.0	30.0	17.0	21.0	18.0	22.0	18.0	5.0	6.0	11.0	15.0	6.0	44.0	11.0	15.0	23.0	24.0	30.0	26.0	88.0	2.0	17.0	21.0	20.0	17.0	42.0	39.0	22.0	7.0	13.0	33.0	19.0	8.0	26.0	23.0	4.0	22.0	16.0	8.0	6.0	43.0	19.0	36.0	4.0	18.0	5.0	10.0	11.0	26.0	7.0	10.0	10.0	21.0	9.0	18.0	7.0	10.0	62.0	14.0	16.0	36.0	13.0	15.0	75.0	9.0	21.0	20.0	24.0	14.0	9.0	14.0	14.0	19.0	6.0	17.0	16.0	22.0	14.0	11.0	22.0	7.0	11.0	28.0	10.0	5.0	10.0	10.0	28.0	10.0	10.0	12.0	18.0	20.0	38.0	94.0
Sample002	All_modifications	80.0	59.0	5.0	7.0	121.0	55.0	16.0	3.0	38.0	18.0	10.0	12.0	29.0	6.0	14.0	17.0	68.0	11.0	23.0	16.0	57.0	15.0	12.0	19.0	20.0	70.0	50.0	45.0	48.0	71.0	64.0	92.0	73.0	69.0	143.0	92.0	91.0	107.0	95.0	95.0	94.0	106.0	95.0	96.0	118.0	102.0	134.0	115.0	132.0	127.0	179.0	230.0	205.0	166.0	186.0	142.0	157.0	178.0	164.0	152.0	182.0	156.0	167.0	160.0	169.0	169.0	191.0	185.0	213.0	250.0	246.0	248.0	243.0	280.0	275.0	277.0	267.0	283.0	275.0	352.0	340.0	365.0	346.0	355.0	374.0	380.0	383.0	430.0	418.0	418.0	437.0	453.0	441.0	568.0	602.0	661.0	650.0	685.0	716.0	763.0	1028.0	1000.0	1322.0	1399.0	1467.0	1587.0	2524.0	2753.0	6565.0	7472.0	3864.0	2719.0	2400.0	2041.0	1847.0	1669.0	1581.0	1078.0	772.0	647.0	522.0	488.0	449.0	436.0	399.0	407.0	383.0	374.0	371.0	335.0	343.0	327.0	313.0	325.0	310.0	276.0	281.0	284.0	270.0	263.0	268.0	240.0	243.0	304.0	272.0	293.0	226.0	254.0	196.0	189.0	183.0	180.0	183.0	167.0	186.0	172.0	164.0	162.0	163.0	161.0	143.0	175.0	153.0	133.0	129.0	164.0	120.0	114.0	128.0	128.0	115.0	126.0	117.0	119.0	111.0	115.0	109.0	77.0	79.0	74.0	74.0	64.0	101.0	59.0	60.0	68.0	69.0	75.0	71.0	134.0	48.0	63.0	82.0	165.0	139.0	158.0	159.0	142.0	126.0	120.0	139.0	125.0	115.0	132.0	129.0	110.0	130.0	120.0	113.0	107.0	140.0	115.0	132.0	100.0	114.0	101.0	113.0	107.0	122.0	105.0	108.0	107.0	118.0	107.0	117.0	105.0	108.0	160.0	112.0	114.0	134.0	111.0	114.0	173.0	114.0	126.0	118.0	122.0	110.0	105.0	110.0	110.0	115.0	108.0	119.0	112.0	117.0	19.0	16.0	29.0	15.0	19.0	33.0	49.0	8.0	13.0	48.0	51.0	22.0	20.0	31.0	21.0	23.0	41.0	94.0
Sample001	Insertions	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	3.0	4.0	1.0	3.0	3.0	0.0	1.0	3.0	2.0	4.0	6.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0.0	7.0	7.0	0.0	5.0	5.0	0.0	2.0	2.0	0.0	0.0	0.0	0.0
Sample001	Insertions_Left	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	3.0	1.0	0.0	3.0	0.0	0.0	1.0	2.0	0.0	4.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	2.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	7.0	0.0	0.0	5.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0
Sample001	Deletions	77.0	2.0	0.0	0.0	23.0	5.0	8.0	3.0	37.0	14.0	4.0	0.0	21.0	1.0	2.0	1.0	1.0	3.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	14.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	3.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	6.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	4.0	4.0	12.0	4.0	5.0	4.0	4.0	4.0	4.0	4.0	4.0	4.0	4.0	4.0	7.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	10.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	1.0	53.0	53.0	53.0	1.0	0.0	0.0	0.0	2.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	1.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	6.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	147.0	145.0	145.0	145.0	145.0	145.0	147.0	147.0	147.0	147.0	147.0	147.0	148.0	150.0	150.0	150.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	148.0	147.0	148.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	149.0	148.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	147.0	2.0	8.0	4.0	6.0	6.0	2.0	41.0	0.0	0.0	42.0	16.0	12.0	9.0	20.0	1.0	0.0	0.0	0.0
Sample001	Substitutions	26.0	70.0	5.0	10.0	127.0	61.0	14.0	11.0	5.0	11.0	11.0	12.0	14.0	12.0	16.0	7.0	69.0	7.0	11.0	14.0	100.0	21.0	19.0	16.0	7.0	98.0	45.0	10.0	1.0	36.0	16.0	23.0	12.0	7.0	77.0	31.0	22.0	34.0	8.0	12.0	21.0	36.0	16.0	6.0	34.0	9.0	58.0	20.0	34.0	11.0	44.0	113.0	98.0	49.0	65.0	5.0	25.0	24.0	20.0	7.0	54.0	12.0	13.0	13.0	10.0	18.0	15.0	6.0	17.0	90.0	45.0	16.0	9.0	43.0	19.0	7.0	7.0	13.0	13.0	19.0	8.0	28.0	20.0	12.0	14.0	22.0	15.0	31.0	15.0	15.0	12.0	28.0	18.0	26.0	37.0	36.0	36.0	18.0	13.0	21.0	81.0	6.0	18.0	12.0	29.0	9.0	20.0	8.0	59.0	30.0	22.0	18.0	14.0	15.0	6.0	10.0	13.0	6.0	7.0	7.0	9.0	17.0	6.0	13.0	8.0	8.0	18.0	6.0	31.0	2.0	12.0	6.0	14.0	3.0	21.0	8.0	6.0	15.0	8.0	26.0	17.0	8.0	6.0	39.0	9.0	13.0	13.0	33.0	5.0	14.0	12.0	12.0	22.0	9.0	40.0	6.0	18.0	2.0	22.0	14.0	9.0	56.0	17.0	12.0	12.0	67.0	7.0	19.0	22.0	17.0	11.0	20.0	35.0	13.0	13.0	40.0	18.0	4.0	5.0	8.0	34.0	5.0	48.0	15.0	19.0	19.0	26.0	12.0	17.0	88.0	5.0	10.0	37.0	13.0	7.0	36.0	21.0	26.0	10.0	19.0	38.0	14.0	9.0	36.0	10.0	9.0	16.0	11.0	8.0	10.0	38.0	15.0	26.0	5.0	11.0	6.0	7.0	13.0	27.0	10.0	7.0	14.0	30.0	14.0	12.0	13.0	10.0	52.0	10.0	17.0	50.0	12.0	25.0	96.0	10.0	22.0	26.0	18.0	24.0	6.0	11.0	6.0	16.0	6.0	19.0	15.0	15.0	17.0	19.0	44.0	15.0	20.0	25.0	11.0	7.0	7.0	15.0	23.0	11.0	15.0	14.0	27.0	22.0	45.0	100.0
Sample001	All_modifications	103.0	72.0	5.0	10.0	150.0	66.0	23.0	15.0	42.0	28.0	19.0	13.0	38.0	16.0	18.0	9.0	73.0	12.0	16.0	21.0	102.0	21.0	19.0	16.0	7.0	98.0	45.0	24.0	1.0	36.0	16.0	23.0	12.0	7.0	77.0	31.0	22.0	36.0	8.0	12.0	21.0	38.0	16.0	6.0	34.0	9.0	58.0	20.0	34.0	11.0	44.0	113.0	98.0	49.0	65.0	5.0	26.0	24.0	23.0	7.0	54.0	12.0	13.0	13.0	10.0	18.0	15.0	6.0	17.0	90.0	45.0	16.0	9.0	43.0	19.0	13.0	7.0	13.0	13.0	19.0	8.0	29.0	20.0	12.0	14.0	22.0	16.0	31.0	15.0	15.0	12.0	28.0	19.0	26.0	37.0	37.0	36.0	18.0	13.0	21.0	81.0	6.0	18.0	12.0	30.0	9.0	20.0	12.0	63.0	42.0	26.0	23.0	18.0	19.0	10.0	14.0	17.0	10.0	11.0	11.0	13.0	24.0	6.0	13.0	8.0	9.0	18.0	6.0	31.0	2.0	12.0	7.0	15.0	15.0	23.0	9.0	7.0	15.0	8.0	26.0	18.0	9.0	7.0	92.0	62.0	66.0	14.0	33.0	5.0	14.0	14.0	12.0	23.0	9.0	40.0	6.0	18.0	2.0	22.0	14.0	10.0	56.0	17.0	12.0	13.0	67.0	7.0	20.0	22.0	17.0	11.0	20.0	41.0	13.0	13.0	40.0	18.0	4.0	5.0	9.0	35.0	6.0	48.0	15.0	19.0	19.0	26.0	12.0	17.0	88.0	5.0	10.0	37.0	160.0	152.0	181.0	166.0	171.0	155.0	166.0	185.0	161.0	156.0	183.0	157.0	157.0	166.0	161.0	158.0	157.0	185.0	162.0	173.0	152.0	158.0	153.0	154.0	160.0	174.0	158.0	154.0	162.0	177.0	161.0	159.0	160.0	157.0	199.0	157.0	164.0	197.0	159.0	174.0	244.0	157.0	169.0	173.0	165.0	171.0	153.0	158.0	153.0	163.0	153.0	166.0	162.0	162.0	19.0	27.0	48.0	22.0	27.0	27.0	59.0	14.0	7.0	62.0	44.0	23.0	26.0	36.0	28.0	22.0	45.0	100.0