Amplicon Unmodified% Modified% Reads_in_input Reads_aligned_all_amplicons Reads_aligned Unmodified Modified Discarded Insertions Deletions Substitutions Only Insertions Only Deletions Only Substitutions Insertions and Deletions Insertions and Substitutions Deletions and Substitutions Insertions Deletions and Substitutions Reference 37.96368018 62.03631982 12317 11619 11619 4411 7208 0 1504 5516 447 1300 5461 188 0 204 55 0